- Analytes
- LHX1
LHX1
Name: |
LIM homeobox 1
|
Symbol: |
LHX1
|
Version of Orphanet: |
2023-06-22 14:14:43
|
Synonyms: |
LIM-1
LIM1
|
XREF(s): | |
Created: |
13 May 2019 - 01:01
|
Changed: |
22 Jun 2023 - 16:14
|
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Disorders of Sex Development - Primary Ovarian Insufficiency - Hypogonadotropic Hypogonadism - UGent
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments AARS2 99.98 1 AKR1C2 91.19 1 AKR1C4 100.00 1 AMH 100.00 1 AMHR2 99.96 1 ANOS1 99.96 1 AR 99.76 1 ARX 95.36 1 ATRX 99.44 1 AXL 99.97 1 BMP15 99.98 1 BMP4 100.00 1 BNC1 100.00 1 CBX2 100.00 1 CHD7 99.99 1 CLPP 99.99 1 CREBBP 99.97 1 CYB5A 99.98 1 CYP11A1 99.99 1 CYP11B1 100.00 1 CYP17A1 100.00 1 CYP19A1 99.99 1 CYP21A2 99.85 1 DHCR7 99.97 1 DHH 100.00 1 DHX37 99.98 1 DMRT1 99.99 1 DMXL2 99.86 1 DUSP6 99.99 1 EIF4ENIF1 100.00 1 EP300 99.97 1 ESR1 100.00 1 ESR2 99.96 1 FANCM 99.83 1 FEZF1 100.00 1 FGF17 99.81 1 FGF8 100.00 1 FGF9 100.00 1 FGFR1 100.00 1 FGFR2 99.99 1 FIGLA 99.95 1 FLRT3 100.00 1 FOXL2 99.97 1 FSHB 100.00 1 FSHR 99.99 1 GATA4 99.99 1 GDF9 99.98 1 GNRH1 99.96 1 GNRHR 99.94 1 HDAC8 99.74 1 HESX1 99.77 1 HFM1 89.74 1 HHAT 99.93 1 HOXA13 99.94 1 HS6ST1 99.99 1 HSD17B3 99.77 1 HSD17B4 99.71 1 HSD3B2 100.00 1 IL17RD 99.94 1 INSL3 98.02 1 KHDRBS1 99.35 1 KISS1 99.97 1 KISS1R 100.00 1 LARS2 99.96 1 LEP 100.00 1 LEPR 92.52 1 LHB 99.93 1 LHCGR 99.94 1 LHX1 99.96 1 LHX3 99.99 1 LHX4 99.99 1 MAMLD1 99.84 1 MAP3K1 99.93 1 MCM8 98.78 1 MCM9 99.76 1 MEIOB 99.98 1 MID1 99.90 1 MRPS22 99.87 1 MSH4 89.29 1 MSH5 100.00 1 NANOS3 100.00 1 NBN 99.93 1 NOBOX 99.95 1 NR0B1 99.98 1 NR2F2 100.00 1 NR5A1 99.92 1 NSMF 100.00 1 NUP107 97.46 1 OTUD4 99.83 1 PATL2 99.99 1 PCSK1 99.99 1 PNPLA6 99.99 1 POF1B 99.34 1 POLR2C 99.99 1 POLR3A 99.97 1 PORCN 99.98 1 PROK2 98.65 1 PROKR2 100.00 1 PROP1 99.88 1 PSMC3IP 99.82 1 RNF216 99.99 1 RSPO1 99.99 1 RXFP2 99.99 1 SEMA3A 99.42 1 SEMA7A 99.90 1 SOHLH1 100.00 1 SOHLH2 100.00 1 SOX10 100.00 1 SOX2 100.00 1 SOX3 100.00 1 SOX8 99.99 1 SOX9 100.00 1 SPIDR 99.96 1 SPRY4 100.00 1 SRD5A2 100.00 1 SRY 51.98 1 STAG3 98.99 1 GUCY2C 99.97 1 SYCE1 99.99 1 TAC3 99.94 1 TACR3 99.99 1 TP63 99.97 1 TSPYL1 100.00 1 TWNK 100.00 1 WDR11 99.91 1 WNT4 99.94 1 WT1 99.99 1 WWOX 100.00 1 ZFPM2 100.00 1 ZNRF3 99.94 1 -
Nephropathies, hereditary (219 genes) - KUL
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments ACE 95.00 0 NM_000789.4 ACTN4 95.00 0 NM_004924.6 AGT 95.00 0 NM_001384479.1 AGTR1 95.00 0 NM_031850.4 AGXT 95.00 0 NM_000030.3 ALG5 95.00 0 NM_013338.5 ALG8 95.00 0 NM_024079.5 ALG9 95.00 0 NM_024740.2 AMN 95.00 0 NM_030943.4 ANKS6 95.00 0 NM_173551.5 ANLN 95.00 0 NM_018685.5 ANOS1 95.00 0 NM_000216.4 AP2S1 95.00 0 NM_004069.6 APOA1 95.00 0 NM_000039.3 APOA2 95.00 0 NM_001643.2 APOC2 95.00 0 NM_000483.5 APOE 95.00 0 NM_000041.4 APOL1 95.00 0 NM_003661.4 APRT 95.00 0 NM_000485.3 ARHGAP24 95.00 0 NM_001025616.3 ARHGDIA 95.00 0 NM_001185077.3 ATP6V0A4 95.00 0 NM_020632.3 ATP6V1B1 95.00 0 NM_001692.4 BMP4 95.00 0 NM_001202.6 BNC2 95.00 0 NM_017637.6 BSND 95.00 0 NM_057176.3 C3 95.00 0 NM_000064.4 CA2 95.00 0 NM_000067.3 CACNA1D 95.00 0 NM_000720.4 CACNA1H 95.00 0 NM_021098.3 CASR 95.00 0 NM_000388.4 CD2AP 95.00 0 NM_012120.3 CD46 95.00 0 NM_002389.4 CDC73 95.00 0 NM_024529.5 CDK20 95.00 0 NM_001039803.3 CEP164 95.00 0 NM_014956.5 CEP290 95.00 0 NM_025114.4 CEP83 95.00 0 NM_016122.3 CFB 95.00 0 NM_001710.6 CFH 95.00 0 NM_000186.4 CFHR1 95.00 0 NM_002113.3 CFHR3 95.00 0 NM_021023.6 CFHR5 95.00 0 NM_030787.4 CFI 95.00 0 NM_000204.5 CLCN2 95.00 0 NM_004366.6 CLCN5 95.00 0 NM_000084.5 CLCNKA 95.00 0 NM_004070.4 CLCNKB 95.00 0 NM_000085.5 CLDN10 95.00 0 NM_006984.5 CLDN16 95.00 0 NM_006580.4 CLDN19 95.00 0 NM_148960.3 CNNM2 95.00 0 NM_017649.5 COL4A1 95.00 0 NM_001845.6 COL4A3 95.00 0 NM_000091.5 COL4A4 95.00 0 NM_000092.5 COL4A5 95.00 0 NM_000495.5 COQ2 95.00 0 NM_015697.9 COQ6 95.00 0 NM_182476.3 COQ8B 95.00 0 NM_024876.4 CRB2 95.00 0 NM_173689.7 CTNS 95.00 0 NM_004937.3 CUBN 95.00 0 NM_001081.4 CUL3 95.00 0 NM_003590.5 CYP11B1 95.00 0 NM_000497.4 CYP11B2 95.00 0 NM_000498.3 CYP17A1 95.00 0 NM_000102.4 CYP24A1 95.00 0 NM_000782.5 DAAM2 95.00 0 NM_001201427.2 DGKE 95.00 0 NM_003647.3 DLEC1 95.00 0 NM_182643.3 DNAJB11 95.00 0 NM_016306.6 DSTYK 95.00 0 NM_015375.3 DZIP1L 95.00 0 NM_173543.3 EGF 95.00 0 NM_001963.6 EHHADH 95.00 0 NM_001966.4 EMP2 95.00 0 NM_001424.6 EYA1 95.00 0 NM_000503.6 FAM20A 95.00 0 NM_017565.4 FAN1 95.00 0 NM_014967.5 FAT1 95.00 0 NM_005245.4 FGA 95.00 0 NM_021871.4 FGF20 95.00 0 NM_019851.3 FGF23 95.00 0 NM_020638.3 FN1 95.00 0 NM_212482.4 FOXC1 95.00 0 NM_001453.3 FOXC2 95.00 0 NM_005251.3 FOXI1 95.00 0 NM_012188.5 FXYD2 95.00 0 NM_001680.5 GANAB 95.00 0 NM_198335.4 GATA3 95.00 0 NM_001002295.2 GATM 95.00 0 NM_001482.3 GDNF 95.00 0 NM_000514.4 GLA 95.00 0 NM_000169.3 GLIS2 95.00 0 NM_032575.3 GNA11 95.00 0 NM_002067.5 GREB1L 95.00 0 NM_001142966.3 GRHPR 95.00 0 NM_012203.2 GRIP1 95.00 0 NM_021150.4 GSN 95.00 0 NM_000177.5 HNF1A 95.00 0 NM_000545.8 HNF1B 95.00 0 NM_000458.4 HNF4A 95.00 0 NM_175914.5 HOGA1 95.00 0 NM_138413.4 HOXA13 95.00 0 NM_000522.5 HPRT1 95.00 0 NM_000194.3 HSD11B2 95.00 0 NM_000196.4 IFT140 95.00 0 NM_014714.4 IFT81 95.00 0 NM_014055.4 INF2 95.00 0 NM_022489.4 INVS 95.00 0 NM_014425.5 ITGA8 95.00 0 NM_003638.3 ITSN1 95.00 0 NM_003024.3 ITSN2 95.00 0 NM_147152.3 JAG1 95.00 0 NM_000214.3 KANK2 95.00 0 NM_001136191.3 KCNA1 95.00 0 NM_000217.3 KCNJ1 95.00 0 NM_000220.6 KCNJ10 95.00 0 NM_002241.5 KCNJ5 95.00 0 NM_000890.5 KIRREL1 95.00 0 NM_018240.7 KL 95.00 0 NM_004795.4 KLHL3 95.00 0 NM_017415.3 LAMB2 95.00 0 NM_002292.4 LCAT 95.00 0 NM_000229.2 LDHD 95.00 0 NM_153486.4 LHX1 95.00 0 NM_005568.5 LIFR 95.00 0 NM_002310.6 LMX1B 95.00 0 NM_002316.4 LYZ 95.00 0 NM_000239.3 MAGED2 95.00 0 NM_177433.3 MAGI2 95.00 0 NM_012301.4 MAPKBP1 95.00 0 NM_001128608.2 MMACHC 95.00 0 NM_015506.3 MOCOS 95.00 0 NM_017947.4 MTX2 95.00 0 NM_006554.5 MUC1 95.00 0 NM_002456.6 MYH9 95.00 0 NM_002473.6 MYO1E 95.00 0 NM_004998.4 NEK8 95.00 0 NM_178170.3 NOTCH2 95.00 0 NM_024408.4 NPHP1 95.00 0 NM_000272.5 NPHP3 95.00 0 NM_153240.5 NPHP4 95.00 0 NM_015102.5 NPHS1 95.00 0 NM_004646.4 NPHS2 95.00 0 NM_014625.4 NR3C1 95.00 0 NM_001018077.1 NR3C2 95.00 0 NM_000901.5 NUP107 95.00 0 NM_020401.4 NUP133 95.00 0 NM_018230.3 NUP160 95.00 0 NM_015231.3 NUP85 95.00 0 NM_024844.5 NUP93 95.00 0 NM_014669.5 OCRL 95.00 0 NM_000276.4 OFD1 95.00 0 NM_003611.3 PAX2 95.00 0 NM_003987.5 PBX1 95.00 0 NM_002585.4 PCBD1 95.00 0 NM_000281.4 PDSS2 95.00 0 NM_020381.4 PHEX 95.00 0 NM_000444.6 PKD1 95.00 0 NM_001009944.3 PKD2 95.00 0 NM_000297.4 PKHD1 95.00 0 NM_138694.4 PLCE1 95.00 0 NM_016341.4 PODXL 95.00 0 NM_005397.4 PRPS1 95.00 0 NM_002764.4 PTPRO 95.00 0 NM_030667.3 REN 95.00 0 NM_000537.4 RET 95.00 0 NM_020975.6 ROBO2 95.00 0 NM_002942.5 SALL1 95.00 0 NM_002968.3 SARS2 95.00 0 NM_017827.4 SCARB2 95.00 0 NM_005506.4 SCNN1A 95.00 0 NM_001038.6 SCNN1B 95.00 0 NM_000336.3 SCNN1G 95.00 0 NM_001039.4 SDCCAG8 95.00 0 NM_006642.5 SEC61A1 95.00 0 NM_013336.4 SGPL1 95.00 0 NM_003901.4 SIX1 95.00 0 NM_005982.4 SIX5 95.00 0 NM_175875.5 SLC12A1 95.00 0 NM_000338.3 SLC12A3 95.00 0 NM_000339.3 SLC22A12 95.00 0 NM_144585.4 SLC26A1 95.00 0 NM_213613.4 SLC2A2 95.00 0 NM_000340.2 SLC2A9 95.00 0 NM_020041.3 SLC34A1 95.00 0 NM_003052.5 SLC34A3 95.00 0 NM_080877.3 SLC3A1 95.00 0 NM_000341.4 SLC4A1 95.00 0 NM_000342.4 SLC4A4 95.00 0 NM_003759.4 SLC5A2 95.00 0 NM_003041.4 SLC7A9 95.00 0 NM_014270.5 SLIT2 95.00 0 NM_004787.4 SMARCAL1 95.00 0 NM_014140.4 TBC1D1 95.00 0 NM_015173.4 TBC1D8B 95.00 0 NM_017752.3 TBX18 95.00 0 NM_001080508.3 TNS2 95.00 0 NM_015319.2 TRAF3IP1 95.00 0 NM_015650.4 TRAP1 95.00 0 NM_016292.3 TRIM8 95.00 0 NM_030912.3 TRPC6 95.00 0 NM_004621.6 TRPM6 95.00 0 NM_017662.5 TSC1 95.00 0 NM_000368.5 TSC2 95.00 0 NM_000548.5 TTC21B 95.00 0 NM_024753.5 TTR 95.00 0 NM_000371.4 UMOD 95.00 0 NM_003361.4 VHL 95.00 0 NM_000551.4 WDR19 95.00 0 NM_025132.4 WDR72 95.00 0 NM_182758.4 WFS1 95.00 0 NM_006005.3 WNK1 95.00 0 NM_018979.4 WNK4 95.00 0 NM_032387.5 WNT4 95.00 0 NM_030761.5 WT1 95.00 0 NM_024426.6 XDH 95.00 0 NM_000379.4 XPNPEP3 95.00 0 NM_022098.4