- Analytes
- SCP2
SCP2
Name: |
sterol carrier protein 2
|
Symbol: |
SCP2
|
Version of Orphanet: |
2023-06-22 14:14:43
|
XREF(s): | |
Created: |
13 May 2019 - 01:01
|
Changed: |
22 Jun 2023 - 16:14
|
- Charcot-Marie-Tooth (other than type 1A) (gene panel, IPN panel)
- Leukodystrophy (gene panel)
- Metabolic disorders including disorders of glycosylation, peroxisomal disorders, organic acidurias, glycogenosis disorders, neurotransmitter disorders (213 genes)
- Movement Disorders (gene panel)
- Movement Disorders (gene panel)
- Neurodegeneration with Brain Iron Accumulation (gene panel)
-
Inherited Peripheral Neuropathies gene panel (139 genes) - KUL
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments AARS1 100.00 0 NM_001605.2 ABCD1 100.00 0 NM_000033.3 ABHD12 98.00 0 NM_001042472.2 AGTPBP1 99.90 0 NM_001286715.1 AIFM1 100.00 0 NM_004208.3 APTX 99.00 0 NM_175073.2 ARHGEF10 100.00 0 NM_014629.3 ATL1 100.00 0 NM_015915.4 ATL3 100.00 0 NM_015459.4 ATP1A1 100.00 0 NM_000701.7 ATP7A 100.00 0 NM_000052.6 BAG3 100.00 0 NM_004281.3 BICD2 100.00 0 NM_001003800.1 BSCL2 100.00 0 NM_032667.6 MTRFR 100.00 0 NM_152269.4 CCT5 100.00 0 NM_012073.4 CD59 100.00 0 NM_203330.2 CNTNAP1 100.00 0 NM_003632.2 COA7 100.00 0 NM_023077.2 COX6A1 100.00 0 NM_004373.3 CTDP1 98.90 0 NM_004715.4 DCAF8 100.00 0 NM_015726.3 DCTN1 100.00 0 NM_004082.4 DGAT2 100.00 0 NM_032564.4 DHTKD1 99.90 0 NM_018706.6 DNAJB2 100.00 0 NM_001039550.1 DNM2 100.00 0 NM_001005360.2 DNMT1 99.50 0 NM_001130823.2 DRP2 100.00 0 NM_001939.2 DST 100.00 0 NM_001723.5 DYNC1H1 100.00 0 NM_001376.4 EGR2 100.00 0 NM_000399.4 ELP1 100.00 0 NM_003640.4 FBLN5 100.00 0 NM_006329.3 FBXO38 100.00 0 NM_030793.4 FGD4 100.00 0 NM_139241.3 FIG4 100.00 0 NM_014845.5 FLVCR1 100.00 0 NM_014053.3 GAN 100.00 0 NM_022041.3 GARS1 100.00 0 NM_002047.3 GDAP1 100.00 0 NM_018972.3 GJB1 100.00 0 NM_000166.5 GJB3 100.00 0 NM_024009.2 GLA 100.00 0 NM_000169.2 GNB4 100.00 0 NM_021629.3 HADHA 100.00 0 NM_000182.4 HADHB 100.00 0 NM_000183.2 HARS1 100.00 0 NM_002109.5 HINT1 100.00 0 NM_005340.6 HK1 100.00 0 NM_000188.2 HOXD10 100.00 0 NM_002148.3 HSPB1 99.00 0 NM_001540.4 HSPB3 100.00 0 NM_006308.2 HSPB8 100.00 0 NM_014365.2 IARS2 100.00 0 NM_018060.3 IFRD1 99.90 0 NM_001550.3 IGHMBP2 100.00 0 NM_002180.2 INF2 98.80 0 NM_022489.3 ITPR3 99.50 0 NM_002224.3 KARS1 100.00 0 NM_001130089.1 KIF1A 99.90 0 NM_004321.7 KIF1B 100.00 0 NM_015074.3 KIF5A 100.00 0 NM_004984.3 KLHL13 100.00 0 NM_033495.3 LITAF 100.00 0 NM_004862.3 LMNA 99.90 0 NM_170707.3 LRSAM1 100.00 0 NM_138361.5 MARS1 100.00 0 NM_004990.3 MCM3AP 100.00 0 NM_003906.4 MED25 100.00 0 NM_030973.3 MFN2 100.00 0 NM_014874.3 MME 100.00 0 NM_007289.3 MORC2 100.00 0 NM_001303256.2 MPV17 100.00 0 NM_002437.4 MPZ 100.00 0 NM_000530.7 MTMR2 100.00 0 NM_016156.5 MYH7B 99.80 0 NM_024729.3 NAGLU 99.70 0 NM_000263.3 NDRG1 100.00 0 NM_006096.3 NEFH 99.50 0 NM_021076.3 NEFL 99.60 0 NM_006158.4 NGF 100.00 0 NM_002506.2 NTRK1 100.00 0 NM_001012331.1 MED12 100.00 0 NM_015560.2 OPA3 100.00 0 NM_025136.3 PDK3 100.00 0 NM_001142386.2 PDXK 100.00 0 NM_003681.4 PEX1 100.00 0 NM_000466.2 PEX7 100.00 0 NM_000288.3 PHYH 100.00 0 NM_006214.3 PLEKHG5 99.80 0 NM_020631.4 PMP2 100.00 0 NM_002677.4 PMP22 100.00 0 NM_000304.3 PNKP 99.80 0 NM_007254.3 POLG 100.00 0 NM_002693.2 PRDM12 90.30 0 NM_021619.2 PRNP 100.00 0 NM_000311.4 PRPS1 100.00 0 NM_002764.3 PRX 100.00 0 NM_181882.2 RAB7A 100.00 0 NM_004637.5 REEP1 100.00 0 NM_022912.2 RETREG1 99.40 0 NM_001034850.2 SBF1 99.70 0 NM_002972.3 SBF2 100.00 0 NM_030962.3 SCN10A 100.00 0 NM_006514.3 SCN11A 99.80 0 NM_014139.2 SCN9A 100.00 0 NM_002977.3 SCO2 100.00 0 NM_005138.2 SCP2 100.00 0 NM_002979.4 SEPTIN9 99.20 0 NM_006640.4 SETX 100.00 0 NM_015046.6 SGPL1 100.00 0 NM_003901.3 SH3BP4 100.00 0 NM_014521.2 SH3TC2 100.00 0 NM_024577.3 SIGMAR1 100.00 0 NM_005866.3 SLC12A6 100.00 0 NM_133647.1 SLC25A46 100.00 0 NM_138773.3 SLC5A7 100.00 0 NM_021815.4 SORD 91.20 0 NM_003104.5 SOX10 100.00 0 NM_006941.3 SPG11 100.00 0 NM_025137.3 SPTLC1 100.00 0 NM_006415.3 SPTLC2 100.00 0 NM_004863.3 SURF1 99.00 0 NM_003172.3 TDP1 100.00 0 NM_018319.3 TECPR2 100.00 0 NM_014844.4 TFG 100.00 0 NM_006070.5 TRIM2 100.00 0 NM_001130067.1 TRPA1 100.00 0 NM_007332.2 TRPV4 99.90 0 NM_021625.4 TTR 100.00 0 NM_000371.3 TUBB3 100.00 0 NM_006086.3 TWNK 100.00 0 NM_021830.4 TYMP 100.00 0 NM_001953.4 VCP 99.90 0 NM_007126.4 VRK1 100.00 0 NM_003384.2 WARS1 99.80 0 NM_004184.3 WNK1 99.80 0 NM_018979.3 YARS1 100.00 0 NM_003680.3 -
Leukodystrophy - UGent
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments AARS2 99.98 1 ABAT 99.98 1 ABCD1 99.98 1 ACBD5 99.97 1 ACER3 99.76 1 ACOX1 99.98 1 ACP5 100.00 1 ACTL6B 99.90 1 ADAR 99.84 1 ADGRG1 99.90 1 ADSL 99.93 1 AGA 99.92 1 AIFM1 99.92 1 AIMP1 99.97 1 AIMP2 99.99 1 ALDH3A2 99.95 1 ALDH5A1 96.19 1 APP 99.92 1 ARSA 99.99 1 ASAH1 99.90 1 ASPA 99.98 1 ATAD3A 99.62 1 ATP7A 99.87 1 ATP7B 100.00 1 AUH 99.95 1 B3GALNT2 92.79 1 BCAP31 99.95 1 BCS1L 99.99 1 BOLA3 99.22 1 BTD 100.00 1 CBS 17.79 1 CIC 98.32 1 CLCN2 100.00 1 CLN3 99.92 1 CLN5 100.00 1 CLN6 100.00 1 CLN8 100.00 1 CNP 99.98 1 CNTNAP1 99.98 1 COA8 99.94 1 COL4A1 99.99 1 COL4A2 99.98 1 COX10 99.99 1 COX15 100.00 1 CYP21A2 99.91 1 CSF1R 99.92 1 CTC1 100.00 1 CTSA 99.98 1 CTSD 100.00 1 CTSF 99.96 1 CYP27A1 100.00 1 DAG1 100.00 1 DARS1 98.85 1 DARS2 98.31 1 DCAF17 99.84 1 DDHD2 99.97 1 DEGS1 99.99 1 DGUOK 99.93 1 DLAT 99.65 1 DLD 99.89 1 DMXL2 99.86 1 DNAJC5 99.99 1 EARS2 99.96 1 ECHS1 100.00 1 EIF2AK1 99.90 1 EIF2AK2 99.70 1 EIF2B1 99.98 1 EIF2B2 99.90 1 EIF2B3 97.26 1 EIF2B4 99.96 1 EIF2B5 99.98 1 EPRS1 99.53 1 ERCC2 99.98 1 ERCC3 99.90 1 ERCC6 99.60 1 ERCC8 99.79 1 FA2H 99.98 1 HYCC1 99.81 1 FAR1 99.82 1 FARS2 100.00 1 FASTKD2 99.93 1 FBXL4 100.00 1 FDX2 99.99 1 CFH 99.97 1 FIG4 99.83 1 FKTN 99.94 1 FLVCR2 100.00 1 FOLR1 100.00 1 FUCA1 98.72 1 GALC 99.92 1 GALT 100.00 1 GAN 99.98 1 GBE1 99.73 1 GFAP 99.99 1 GFM1 99.95 1 GFM2 99.87 1 GJA1 100.00 1 GJB1 100.00 1 GJC2 100.00 1 GLA 99.90 1 GLB1 100.00 1 GM2A 100.00 1 GNAS 100.00 1 GPHN 99.94 1 GRN 100.00 1 GTF2H5 100.00 1 HEPACAM 100.00 1 HEXA 99.99 1 HEXB 99.91 1 HIKESHI 99.78 1 HLCS 99.97 1 HMGCL 99.31 1 HSD17B4 99.71 1 HSPD1 83.42 1 HTRA1 100.00 1 IBA57 100.00 1 IFIH1 99.84 1 IKBKG 57.34 1 ISCA2 100.00 1 IVD 100.00 1 JAM3 100.00 1 KARS1 99.98 1 L2HGDH 99.92 1 LAMA2 99.95 1 LARGE1 100.00 1 LARS2 99.96 1 LIPT1 99.89 1 LIPT2 99.99 1 LMNB1 99.73 1 LYRM7 99.98 1 MAN2B1 99.99 1 MANBA 99.81 1 MARS2 100.00 1 MCOLN1 100.00 1 MFSD8 99.70 1 MLC1 99.99 1 MMUT 99.68 1 MOCS1 99.95 1 MOCS2 99.96 1 MPLKIP 99.99 1 MPV17 99.98 1 MRPS34 100.00 1 MTFMT 99.98 1 MTHFR 99.97 1 MTO1 90.25 1 NAXD 99.99 1 NAXE 99.99 1 NDUFA2 99.95 1 NDUFA9 100.00 1 NDUFAF1 100.00 1 NDUFAF3 100.00 1 NDUFAF4 99.95 1 NDUFAF6 99.86 1 NDUFS1 99.79 1 NDUFS2 99.66 1 NDUFS4 99.99 1 NDUFS7 99.99 1 NDUFS8 100.00 1 NDUFV1 99.99 1 NEU1 99.98 1 NKX6-2 100.00 1 NOTCH3 99.99 1 NPC1 99.99 1 NPC2 100.00 1 NTNG2 99.98 1 NUBPL 99.62 1 OCLN 82.91 1 OCRL 99.89 1 PAH 99.96 1 PARS2 99.99 1 PCCA 99.90 1 PCCB 99.97 1 PDGFB 99.99 1 PDGFRB 99.99 1 PDHA1 99.04 1 PDHB 99.94 1 PDHX 99.64 1 PDP1 100.00 1 PEX1 98.80 1 PEX10 100.00 1 PEX11B 99.62 1 PEX12 100.00 1 PEX13 99.36 1 PEX14 100.00 1 PEX16 99.94 1 PEX19 99.25 1 PEX2 100.00 1 PEX26 100.00 1 PEX3 99.85 1 PEX5 99.89 1 PEX6 99.99 1 PEX7 99.72 1 PLEKHG2 99.99 1 PLP1 99.98 1 PLPBP 99.99 1 PMPCB 99.94 1 PNPT1 99.56 1 POLG 100.00 1 POLR1C 100.00 1 POLR3A 99.97 1 POLR3B 99.94 1 POLR3K 100.00 1 POMGNT1 99.69 1 POMT1 99.96 1 POMT2 99.98 1 PPT1 97.48 1 PRF1 100.00 1 PSAP 99.94 1 PSAT1 99.98 1 PSPH 99.09 1 PYCR2 99.95 1 QDPR 99.92 1 RARS1 99.76 1 RNASEH2A 99.95 1 RNASEH2B 99.94 1 RNASEH2C 99.99 1 RNASET2 99.99 1 SAMHD1 99.98 1 SCP2 94.94 1 SDHA 99.98 1 SDHAF1 99.99 1 SDHAF2 99.96 1 SDHB 97.32 1 SDHD 82.93 1 SEPSECS 99.78 1 SGO1 99.90 1 SHANK3 98.45 1 SLC13A3 99.98 1 SLC16A2 99.97 1 SLC17A5 99.71 1 SLC20A2 99.95 1 SLC25A12 99.72 1 SLC44A1 99.90 1 SLC7A2 99.97 1 SNAP29 99.85 1 SNORD118 100.00 1 SOX10 100.00 1 SPG11 99.89 1 STN1 99.88 1 STX11 100.00 1 STXBP2 100.00 1 SUCLA2 99.96 1 SUMF1 99.95 1 SUOX 100.00 1 SURF1 100.00 1 TACO1 100.00 1 TMEM106B 99.92 1 TMEM63A 99.91 1 ACD 99.99 1 TREM2 100.00 1 TREX1 100.00 1 TSEN54 100.00 1 TTR 100.00 1 TUBB4A 100.00 1 TWNK 100.00 1 TYMP 99.87 1 TYROBP 99.95 1 UBTF 99.99 1 UFM1 99.25 1 UNC13D 100.00 1 VPS11 99.99 1 WARS2 97.72 1 WT1 99.99 1 XPR1 99.13 1 ZFYVE26 100.00 1 -
Metabolic disorders (213 genes) - VUB
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments ABAT 100.00 0 No comment ABCD1 99.93 0 No comment ACAT1 97.28 0 No comment ACOX1 100.00 0 No comment AGL 99.98 0 No comment AGPS 100.00 0 No comment AGXT 100.00 0 No comment ALDH18A1 100.00 0 No comment ALDH7A1 100.00 0 No comment ALDOA 100.00 0 No comment ALDOB 100.00 0 No comment ALG1 92.65 0 No comment ALG10 100.00 0 No comment ALG11 100.00 0 No comment ALG12 100.00 0 No comment ALG13 99.96 0 No comment ALG14 100.00 0 No comment ALG2 99.94 0 No comment ALG3 99.22 0 No comment ALG5 99.99 0 No comment ALG6 100.00 0 No comment ALG8 95.91 0 No comment ALG9 98.65 0 No comment AMACR 99.83 0 No comment AMT 99.94 0 No comment ASPA 100.00 0 No comment ATP6AP1 99.51 0 No comment ATP6V0A2 100.00 0 No comment ATP6V1A 100.00 0 No comment ATP6V1E1 100.00 0 No comment ATP7A 100.00 0 No comment ATP9B 99.97 0 No comment B3GALNT2 85.88 0 No comment B3GALT6 56.12 0 No comment B3GAT3 95.56 0 No comment B3GLCT 94.89 0 No comment B4GALNT1 100.00 0 No comment B4GALT1 100.00 0 No comment B4GALT7 93.23 0 No comment BCKDHA 100.00 0 No comment BCKDHB 100.00 0 No comment BTD 100.00 0 No comment CAD 100.00 0 No comment CCDC115 100.00 0 No comment CHST14 98.57 0 No comment CHST3 100.00 0 No comment CHST6 100.00 0 No comment CHSY1 91.67 0 No comment COG1 99.24 0 No comment COG2 100.00 0 No comment COG3 100.00 0 No comment COG4 100.00 0 No comment COG5 100.00 0 No comment COG6 100.00 0 No comment COG7 100.00 0 No comment COG8 100.00 0 No comment CRPPA 95.75 0 No comment CTH 100.00 0 No comment D2HGDH 100.00 0 No comment DAD1 100.00 0 No comment DBH 100.00 0 No comment DBT 100.00 0 No comment DDC 100.00 0 No comment DDOST 100.00 0 No comment DHDDS 100.00 0 No comment DNM1L 100.00 0 No comment DOLK 100.00 0 No comment DPAGT1 100.00 0 No comment DPM1 100.00 0 No comment DPM2 100.00 0 No comment DPM3 100.00 0 No comment ENO3 100.00 0 No comment EOGT 100.00 0 No comment EXT1 100.00 0 No comment EXT2 100.00 0 No comment FANCA 100.00 0 No comment FKRP 98.68 0 No comment FKTN 100.00 0 No comment FUT1 100.00 0 No comment G6PC1 100.00 0 No comment GAA 100.00 0 No comment GABRG2 92.03 0 No comment GALE 100.00 0 No comment GALK1 99.95 0 No comment GALNT3 100.00 0 No comment GALT 100.00 0 No comment GAMT 98.60 0 No comment GANAB 100.00 0 No comment GATM 99.26 0 No comment GBE1 100.00 0 No comment GCDH 100.00 0 No comment GCH1 96.30 0 No comment GCSH 76.04 0 No comment GFPT1 99.98 0 No comment GLDC 96.53 0 No comment GMPPA 100.00 0 No comment GMPPB 100.00 0 No comment GNE 100.00 0 No comment GNMT 100.00 0 No comment GNPAT 100.00 0 No comment GYS1 100.00 0 No comment GYS2 100.00 0 No comment HGD 100.00 0 No comment HLCS 100.00 0 No comment HMGCL 100.00 0 No comment HPRT1 94.60 0 No comment HSD17B4 100.00 0 No comment IVD 100.00 0 No comment LAMP2 100.00 0 No comment LARGE1 100.00 0 No comment LDHA 100.00 0 No comment LFNG 82.55 0 No comment MAGT1 100.00 0 No comment MAN1B1 99.99 0 No comment MAOA 99.95 0 No comment MCCC1 100.00 0 No comment MCCC2 99.99 0 No comment MGAT2 100.00 0 No comment MMAA 100.00 0 No comment MMAB 100.00 0 No comment MMACHC 100.00 0 No comment MOGS 98.73 0 No comment MPDU1 100.00 0 No comment MPI 100.00 0 No comment MMUT 100.00 0 No comment NANS 100.00 0 No comment NGLY1 99.98 0 No comment NUS1 100.00 0 No comment OAT 100.00 0 No comment OST4 100.00 0 No comment PCCA 100.00 0 No comment PCCB 99.98 0 No comment PEX1 100.00 0 No comment PEX10 88.47 0 No comment PEX11B 100.00 0 No comment PEX12 100.00 0 No comment PEX13 100.00 0 No comment PEX14 100.00 0 No comment PEX16 100.00 0 No comment PEX19 100.00 0 No comment PEX2 100.00 0 No comment PEX26 100.00 0 No comment PEX3 100.00 0 No comment PEX5 100.00 0 No comment PEX6 98.56 0 No comment PEX7 91.13 0 No comment PFKM 100.00 0 No comment PGAM2 100.00 0 No comment PGAP1 100.00 0 No comment PGAP2 100.00 0 No comment PGAP3 99.90 0 No comment PGM1 100.00 0 No comment PGM2 100.00 0 No comment PGM3 99.99 0 No comment PHGDH 100.00 0 No comment PHKA1 100.00 0 No comment PHKA2 100.00 0 No comment PHKB 100.00 0 No comment PHKG2 100.00 0 No comment PIGA 100.00 0 No comment PIGC 100.00 0 No comment PIGG 100.00 0 No comment PIGL 100.00 0 No comment PIGM 100.00 0 No comment PIGN 100.00 0 No comment PIGO 100.00 0 No comment PIGV 100.00 0 No comment PIGW 100.00 0 No comment PIGY 100.00 0 No comment PMM2 100.00 0 No comment PNPO 100.00 0 No comment POFUT1 100.00 0 No comment POGLUT1 100.00 0 No comment POMGNT1 100.00 0 No comment POMT1 100.00 0 No comment POMT2 99.90 0 No comment PRKCSH 100.00 0 No comment PSAT1 100.00 0 No comment PYGL 100.00 0 No comment PYGM 100.00 0 No comment RFT1 100.00 0 No comment RPN1 100.00 0 No comment RPN2 100.00 0 No comment RXYLT1 99.84 0 No comment SCP2 100.00 0 No comment SEC23B 100.00 0 No comment SLC25A22 100.00 0 No comment SLC2A1 99.94 0 No comment SLC35A1 100.00 0 No comment SLC35A2 100.00 0 No comment SLC35A3 100.00 0 No comment SLC35C1 100.00 0 No comment SLC35D1 99.99 0 No comment SLC39A8 97.00 0 No comment SLC3A1 100.00 0 No comment SLC6A19 100.00 0 No comment SLC6A8 98.78 0 No comment SLC7A9 100.00 0 No comment SPR 96.81 0 No comment SRD5A3 99.42 0 No comment SSR3 100.00 0 No comment SSR4 99.93 0 No comment ST3GAL3 100.00 0 No comment ST3GAL5 92.64 0 No comment STT3A 100.00 0 No comment STT3B 99.25 0 No comment TMEM165 89.91 0 No comment TMEM199 100.00 0 No comment TRAPPC11 100.00 0 No comment TUSC3 100.00 0 No comment VPS13B 99.25 0 No comment XYLT1 88.83 0 No comment XYLT2 98.70 0 No comment -
Movement Disorders - UGent
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments AARS1 99.99 1 ACTB 100.00 1 ACTL6B 99.90 1 ADAR 99.84 1 ADCY5 99.98 1 ADH1C 99.94 1 AFG3L2 99.97 1 ALDH5A1 96.19 1 ANO3 99.98 1 AP3D1 100.00 1 AP4M1 99.98 1 APTX 99.92 1 ARSA 99.99 1 ARV1 99.85 1 ARX 95.36 1 ATM 99.83 1 ATP13A2 99.96 1 ATP1A3 99.98 1 ATP6AP2 99.55 1 ATP7B 100.00 1 ATP8A2 100.00 1 ATXN2 99.88 1 AUH 99.95 1 BCAP31 99.95 1 BCS1L 99.99 1 C19ORF12 99.99 1 CACNA1A 99.98 1 CACNA1B 100.00 1 CACNA1E 99.82 1 CARS2 99.99 1 CHCHD2 99.89 1 CHMP2B 99.80 1 CHRNA4 100.00 1 CHRNB2 99.99 1 CIZ1 99.94 1 CLPB 99.97 1 CNTNAP1 99.98 1 COASY 99.98 1 COL6A3 99.99 1 COQ9 99.62 1 COX10 99.99 1 COX15 100.00 1 CP 99.95 1 CRAT 99.99 1 CSF1R 99.92 1 CTC1 100.00 1 CYP27A1 100.00 1 DCAF17 99.84 1 DCTN1 99.98 1 DDC 99.67 1 DEGS1 99.99 1 DHDDS 98.65 1 DHX30 99.96 1 DLAT 99.65 1 DLD 99.89 1 DMXL2 99.86 1 DNAJC13 99.86 1 DNAJC5 99.99 1 DNAJC6 99.48 1 DNAL4 99.89 1 DRD3 100.00 1 EARS2 99.96 1 ECHS1 100.00 1 EEF1A2 100.00 1 EIF4G1 100.00 1 EPRS1 99.53 1 ETHE1 84.97 1 FA2H 99.98 1 FASTKD2 99.93 1 FBXO7 99.98 1 FITM2 99.99 1 FOXG1 99.91 1 FOXRED1 100.00 1 FTL 99.99 1 FUCA1 98.72 1 FUS 99.93 1 GABRB2 99.92 1 GAMT 100.00 1 GBA1 96.92 1 GBE1 99.73 1 GCDH 100.00 1 GCH1 99.94 1 GFAP 99.99 1 GFM2 99.87 1 GIGYF2 99.94 1 GJC2 100.00 1 GLB1 100.00 1 GRID2 100.00 1 GM2A 100.00 1 GNAL 100.00 1 GNAO1 99.86 1 GNB1 100.00 1 GPR88 100.00 1 GRIN1 100.00 1 GRIN2B 99.99 1 GRN 100.00 1 GSX2 100.00 1 GTPBP2 99.98 1 HEXA 99.99 1 HIBCH 99.70 1 HPRT1 97.80 1 HSD17B10 99.98 1 HTRA2 99.99 1 HTT 99.98 1 IFIH1 99.84 1 IREB2 99.90 1 IRF2BPL 99.21 1 JAM2 91.82 1 JPH3 100.00 1 KCNA4 100.00 1 KCNMA1 99.89 1 KCNQ2 100.00 1 KCTD17 100.00 1 KMT2B 99.99 1 LIPT1 99.89 1 LIPT2 99.99 1 LRP10 99.99 1 LRPPRC 99.80 1 LRRK2 99.44 1 LYST 99.87 1 MAPT 99.80 1 MAT1A 99.70 1 MCOLN1 100.00 1 MDH2 99.54 1 MECP2 99.95 1 MECR 99.63 1 MED20 99.99 1 MICU1 99.56 1 MMADHC 99.76 1 MPV17 99.98 1 MRE11 99.93 1 MRPS34 100.00 1 MYBPC1 99.77 1 MYORG 99.99 1 NAXD 99.99 1 NDUFA1 99.93 1 NDUFA10 99.98 1 NDUFA12 99.21 1 NDUFA9 100.00 1 NDUFAF4 99.95 1 NDUFAF6 99.86 1 NDUFS1 99.79 1 NDUFS3 100.00 1 NDUFS7 99.99 1 NDUFS8 100.00 1 NHLRC2 99.83 1 NKX2-1 100.00 1 NKX6-2 100.00 1 NPC1 99.99 1 NPC2 100.00 1 NTNG2 99.98 1 NUP62 100.00 1 PANK2 99.99 1 PARK7 99.93 1 PCCA 99.90 1 PCCB 99.97 1 PCDH12 100.00 1 PCDH19 99.98 1 PDE10A 87.37 1 PDE8B 99.98 1 PDGFB 99.99 1 PDGFRB 99.99 1 PDHA1 99.04 1 PDHX 99.64 1 PEAR1 99.89 1 PEX16 99.94 1 PINK1 99.69 1 PLA2G6 99.98 1 PLEKHG2 99.99 1 PLP1 99.98 1 PMPCB 99.94 1 PNKD 100.00 1 PNKP 100.00 1 PNPLA8 99.92 1 PNPT1 99.56 1 PODXL 93.29 1 POLG 100.00 1 POLR3A 99.97 1 PON1 99.70 1 PRKN 99.99 1 PRKRA 99.94 1 PRNP 100.00 1 PRRT2 99.97 1 PTRHD1 100.00 1 PTS 99.93 1 QDPR 99.92 1 RAB11B 100.00 1 RAB39B 99.99 1 RAD51 90.17 1 RELN 99.98 1 REPS1 99.93 1 RHOBTB2 100.00 1 RIC3 100.00 1 RNF216 99.99 1 SCN11A 99.94 1 SCN4A 99.98 1 SCN8A 99.77 1 SCP2 94.94 1 SDHA 99.98 1 SDHAF1 99.99 1 SDHD 82.93 1 SEPSECS 99.78 1 SERAC1 99.90 1 SETX 99.97 1 SGCE 93.12 1 SLC18A2 100.00 1 SLC19A3 99.95 1 SLC20A2 99.95 1 SLC25A42 99.99 1 SLC2A1 99.93 1 SLC30A10 99.99 1 SLC30A9 99.75 1 SLC39A14 92.87 1 SLC44A1 99.90 1 SLC6A3 99.96 1 SLC6A8 99.99 1 SMPD1 100.00 1 SNCA 99.97 1 SNCAIP 99.99 1 SPG11 99.89 1 SPR 99.99 1 SQSTM1 100.00 1 STUB1 99.99 1 SUCLA2 99.96 1 SUOX 100.00 1 SURF1 100.00 1 SYNJ1 99.91 1 SYT1 99.70 1 TAF1 99.84 1 TANGO2 99.85 1 TBC1D24 100.00 1 TENM4 99.99 1 TH 99.99 1 THAP1 99.96 1 TIMM8A 100.00 1 TOR1A 100.00 1 TPI1 99.95 1 TPK1 99.96 1 TRAK1 99.98 1 TRAPPC11 99.93 1 TRAPPC12 99.96 1 TRIT1 99.25 1 TSEN2 99.98 1 TSFM 100.00 1 TUBB4A 100.00 1 TXN2 99.88 1 UBA5 99.95 1 UBTF 99.99 1 UCHL1 99.99 1 UFM1 99.25 1 UGDH 99.77 1 UQCRQ 99.96 1 VAC14 99.91 1 VAMP2 100.00 1 VCP 99.99 1 VPS13A 99.68 1 VPS13C 99.65 1 VPS13D 99.96 1 VPS16 100.00 1 VPS35 99.83 1 WARS2 97.72 1 WDR45 99.99 1 WDR73 99.92 1 XK 99.98 1 XPR1 99.13 1 YY1 100.00 1 ZC4H2 99.98 1 ZNF142 100.00 1 -
Movement Disorders - ULG
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments AARS1 100.00 0 ABAT 100.00 0 ACTB 100.00 0 ACTL6B 100.00 0 ADAR 100.00 0 ADCY5 94.82 0 ADPRS 97.19 0 AFG3L2 95.73 0 AGTPBP1 97.48 0 AIMP1 100.00 0 ALDH5A1 91.82 0 ALG13 99.52 0 ALG6 100.00 0 ALS2 100.00 0 AMT 100.00 0 ANO3 99.99 0 AOPEP 98.17 0 AP3D1 100.00 0 AP4M1 100.00 0 AP5Z1 100.00 0 APTX 100.00 0 ARG1 100.00 0 ARHGEF9 100.00 0 ARSA 100.00 0 ARV1 100.00 0 ARX 76.27 0 ASAH1 100.00 0 ASNS 100.00 0 ASS1 100.00 0 ATAD1 100.00 0 ATCAY 100.00 0 ATM 100.00 0 ATN1 100.00 0 ATP13A2 99.13 0 ATP1A2 99.91 0 ATP1A3 100.00 0 ATP6AP2 98.93 0 ATP7B 100.00 0 ATP8A2 100.00 0 ATXN2 97.08 0 AUH 98.84 0 BCAP31 100.00 0 BCKDHA 100.00 0 BCKDHB 100.00 0 BCS1L 100.00 0 BSCL2 100.00 0 BTK 100.00 0 C19ORF12 100.00 0 C9ORF72 100.00 0 CA8 100.00 0 CACNA1A 100.00 0 CACNA1B 95.99 0 CACNA1E 99.97 0 CACNA1G 100.00 0 CACNB4 100.00 0 CARS2 95.22 0 CBS 100.00 0 CDKL5 99.33 0 CEP290 99.99 0 CHCHD2 100.00 0 CHMP2B 100.00 0 CHRNA2 99.97 0 CHRNA4 99.98 0 CHRNB2 100.00 0 CIZ1 99.96 0 CLCN2 100.00 0 CLCN3 100.00 0 CLCN6 100.00 0 CLPB 100.00 0 CLTC 100.00 0 CNTNAP1 100.00 0 COASY 100.00 0 COL6A3 100.00 0 COQ8A 100.00 0 COQ9 100.00 0 COX10 100.00 0 COX15 100.00 0 COX20 100.00 0 CP 99.98 0 CRAT 100.00 0 CRH 100.00 0 CRLF1 89.13 0 CSF1R 100.00 0 CSTB 100.00 0 CTC1 100.00 0 CTDP1 90.20 0 CTNNB1 100.00 0 CTSA 100.00 0 CTSD 100.00 0 CTSF 89.18 0 CUL4B 98.64 0 CWF19L1 100.00 0 CYB5R3 95.77 0 CYFIP2 100.00 0 CYP27A1 99.38 0 DARS1 100.00 0 DBT 100.00 0 DCAF17 99.11 0 DCC 100.00 0 DCTN1 100.00 0 DDC 100.00 0 DEGS1 100.00 0 DEPDC5 100.00 0 DHDDS 100.00 0 DHX30 100.00 0 DLAT 100.00 0 DLD 100.00 0 DMXL2 99.99 0 DNAJB2 100.00 0 DNAJC12 100.00 0 DNAJC13 100.00 0 DNAJC19 100.00 0 DNAJC5 100.00 0 DNAJC6 100.00 0 DNAL4 100.00 0 DNM1L 100.00 0 DNMT1 99.83 0 EARS2 100.00 0 ECHS1 100.00 0 EEF1A2 98.47 0 ELOVL4 100.00 0 EPRS1 100.00 0 ETHE1 100.00 0 FA2H 92.84 0 FARS2 100.00 0 FASTKD2 100.00 0 FBXL4 100.00 0 FBXO7 100.00 0 FGF14 100.00 0 FITM2 100.00 0 FOLR1 100.00 0 FOXG1 87.63 0 FOXRED1 100.00 0 FRRS1L 87.33 0 FTL 100.00 0 FUCA1 99.67 0 FUS 100.00 0 FXN 96.07 0 GABRA2 100.00 0 GABRB2 100.00 0 GALT 100.00 0 GAMT 98.07 0 GBA1 100.00 0 GBE1 100.00 0 GCDH 100.00 0 GCH1 98.16 0 GFAP 100.00 0 GFM1 100.00 0 GFM2 99.99 0 GJC2 88.27 0 GLB1 100.00 0 GLDC 97.21 0 GLRA1 100.00 0 GLRB 100.00 0 GM2A 100.00 0 GNAL 100.00 0 GNAO1 100.00 0 GNB1 100.00 0 GOSR2 100.00 0 GPHN 100.00 0 GPR88 77.04 0 GRID2 100.00 0 GRIN1 100.00 0 GRIN2B 100.00 0 GRN 100.00 0 GSX2 100.00 0 GTPBP2 99.48 0 HECW2 100.00 0 HEXA 100.00 0 HEXB 99.87 0 HIBCH 100.00 0 HPRT1 97.15 0 HSD17B10 100.00 0 HTT 99.18 0 IFIH1 100.00 0 IREB2 100.00 0 IRF2BPL 99.88 0 IVD 100.00 0 JAM2 100.00 0 JPH3 100.00 0 KCNA1 100.00 0 KCNA2 100.00 0 KCNA4 100.00 0 KCNC3 78.67 0 KCND3 100.00 0 KCNMA1 100.00 0 KCNQ2 100.00 0 KCNT1 99.92 0 KCTD17 95.63 0 KCTD7 99.64 0 KIF1C 100.00 0 KIF5A 100.00 0 KMT2B 96.75 0 L2HGDH 100.00 0 LIAS 100.00 0 LIPT1 100.00 0 LIPT2 92.08 0 LMNB1 98.51 0 LRPPRC 100.00 0 LRRK2 100.00 0 LYST 100.00 0 MAPT 100.00 0 MARS2 100.00 0 MCEE 100.00 0 MCOLN1 98.10 0 MDH2 100.00 0 MECP2 100.00 0 MECR 100.00 0 MED20 100.00 0 MEF2C 100.00 0 MFSD8 100.00 0 MICU1 100.00 0 MMAA 100.00 0 MMAB 100.00 0 MMADHC 100.00 0 MMUT 100.00 0 MPV17 100.00 0 MRE11 100.00 0 MRPS34 99.28 0 MTHFR 100.00 0 MTR 100.00 0 MTRFR 100.00 0 MTRR 100.00 0 MYBPC1 100.00 0 MYORG 100.00 0 NALCN 100.00 0 NAXD 100.00 0 NDUFA1 100.00 0 NDUFA10 99.52 0 NDUFA12 100.00 0 NDUFA2 100.00 0 NDUFA9 100.00 0 NDUFAF2 100.00 0 NDUFAF4 100.00 0 NDUFAF5 100.00 0 NDUFAF6 95.34 0 NDUFS1 100.00 0 NDUFS3 100.00 0 NDUFS4 100.00 0 NDUFS7 100.00 0 NDUFS8 100.00 0 NDUFV1 100.00 0 NEU1 100.00 0 NGLY1 100.00 0 NHLRC2 100.00 0 NKX2-1 89.99 0 NKX6-2 70.62 0 NPC1 100.00 0 NPC2 100.00 0 NTN1 94.10 0 NTNG2 91.87 0 NUP62 100.00 0 MED12 100.00 0 OPA3 100.00 0 PAH 100.00 0 PANK2 95.70 0 PARK7 100.00 0 PODXL 96.85 0 PCBD1 92.74 0 PCCA 100.00 0 PCCB 100.00 0 PCDH12 100.00 0 PCDH19 100.00 0 PDE10A 100.00 0 PDE2A 100.00 0 PDE8B 97.56 0 PDGFB 100.00 0 PDGFRB 100.00 0 PDHA1 100.00 0 PDHB 100.00 0 PDHX 100.00 0 PDYN 100.00 0 PEX16 100.00 0 PGK1 100.00 0 PIGP 100.00 0 PINK1 91.10 0 PLA2G6 100.00 0 PLEKHG2 100.00 0 PLP1 100.00 0 PMM2 100.00 0 PMPCB 100.00 0 PNKD 100.00 0 PNKP 100.00 0 PNPLA8 100.00 0 PNPT1 100.00 0 POLG 100.00 0 POLR1C 100.00 0 POLR3A 100.00 0 PPT1 100.00 0 PRICKLE1 100.00 0 PRKCG 100.00 0 PRKN 100.00 0 PRKRA 100.00 0 PRNP 100.00 0 PRRT2 100.00 0 PTRHD1 100.00 0 PTS 100.00 0 PUM1 100.00 0 PURA 88.25 0 QDPR 99.38 0 RAB11B 100.00 0 RAB39B 100.00 0 RAD51 100.00 0 RELN 100.00 0 REPS1 100.00 0 RHOBTB2 100.00 0 RNF216 100.00 0 SACS 100.00 0 SCARB2 100.00 0 SCN11A 99.99 0 SCN1A 100.00 0 SCN2A 100.00 0 SCN4A 100.00 0 SCN8A 100.00 0 SCP2 100.00 0 SCYL1 100.00 0 SDHA 98.70 0 SDHAF1 96.31 0 SDHD 100.00 0 SEPSECS 100.00 0 SERAC1 100.00 0 SETD5 100.00 0 SETX 100.00 0 SGCE 100.00 0 SLC16A2 100.00 0 SLC18A2 100.00 0 SLC19A3 99.96 0 SLC1A3 100.00 0 SLC20A2 100.00 0 SLC25A19 100.00 0 SLC25A42 99.96 0 SLC2A1 100.00 0 SLC30A10 100.00 0 SLC30A9 100.00 0 SLC39A14 99.95 0 SLC39A8 99.72 0 SLC44A1 97.36 0 SLC6A1 100.00 0 SLC6A3 100.00 0 SLC6A5 100.00 0 SLC6A8 96.54 0 SLC9A6 97.84 0 SMPD1 100.00 0 SNCA 100.00 0 SPG11 100.00 0 SPOP 100.00 0 SPR 97.94 0 SPTBN2 100.00 0 SQSTM1 95.44 0 SRD5A3 98.74 0 ST3GAL5 92.43 0 STUB1 99.46 0 STXBP1 100.00 0 SUCLA2 100.00 0 SUCLG1 99.97 0 SUMF1 100.00 0 SUOX 100.00 0 SURF1 92.90 0 SYNE1 100.00 0 SYNJ1 100.00 0 SYT1 100.00 0 TACO1 99.96 0 TAF1 100.00 0 TANGO2 100.00 0 TARDBP 100.00 0 TBC1D24 100.00 0 TBK1 100.00 0 TBL1XR1 100.00 0 TENM4 100.00 0 TGM6 100.00 0 TH 100.00 0 THAP1 100.00 0 TIMM8A 100.00 0 TMEM240 100.00 0 TOR1A 100.00 0 TPI1 100.00 0 TPK1 100.00 0 TRAK1 100.00 0 TRAPPC11 100.00 0 TRAPPC12 100.00 0 TREM2 100.00 0 TRIT1 100.00 0 TSC1 100.00 0 TSC2 100.00 0 TSEN2 100.00 0 TSEN54 94.95 0 TSFM 92.64 0 TTPA 87.42 0 TUBB4A 100.00 0 TXN2 100.00 0 TYROBP 100.00 0 UBA5 100.00 0 UBQLN2 99.91 0 UBR4 99.78 0 UBTF 100.00 0 UFM1 100.00 0 UGDH 100.00 0 UNC13A 99.92 0 UQCRQ 100.00 0 VAC14 100.00 0 VAMP1 100.00 0 VAMP2 100.00 0 VCP 98.45 0 VPS13A 100.00 0 VPS13C 100.00 0 VPS13D 100.00 0 VPS16 100.00 0 VPS35 100.00 0 VPS41 100.00 0 VPS4A 100.00 0 VWA3B 100.00 0 WARS2 100.00 0 WDR45 100.00 0 WDR73 100.00 0 WDR81 100.00 0 WWOX 100.00 0 XK 99.86 0 XPA 99.77 0 XPC 100.00 0 XPR1 100.00 0 YY1 100.00 0 ZC4H2 100.00 0 ZFYVE26 100.00 0 ZNF142 100.00 0 -
Neurodegeneration with Brain Iron Accumulation (NBIA) - UGent
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments AP4M1 100.00 1 ATP13A2 100.00 1 C19ORF12 100.00 1 COASY 100.00 1 CP 100.00 1 CRAT 100.00 1 DCAF17 100.00 1 DDHD1 100.00 1 FA2H 100.00 1 FTL 100.00 1 GTPBP2 100.00 1 PANK2 100.00 1 PLA2G6 100.00 1 SCP2 100.00 1 WDR45 100.00 1 REPS1 100.00 1