- Analytes
- HGD
HGD
Name: |
homogentisate 1,2-dioxygenase
|
Symbol: |
HGD
|
Version of Orphanet: |
2023-06-22 14:14:43
|
Synonyms: |
HGO
homogentisate oxidase
|
XREF(s): | |
Created: |
13 May 2019 - 01:01
|
Changed: |
22 Jun 2023 - 16:14
|
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Dermatogenetic / severe, rare and hereditary genodermatoses (394 genes) - ULB
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments A2ML1 100.00 0 AAGAB 97.88 0 ABCA12 100.00 0 ABCB6 100.00 0 ABCC6 99.97 0 ABHD5 100.00 0 ACD 100.00 0 ADAM10 100.00 0 ADAMTS2 95.82 0 ADAR 100.00 0 AIM1 100.00 0 AKT1 100.00 0 ALDH18A1 100.00 0 ALDH3A2 99.94 0 ALOX12B 100.00 0 ALOXE3 100.00 0 ANTXR1 100.00 0 AP1S1 100.00 0 AP3B1 100.00 0 APCDD1 99.97 0 AQP5 99.87 0 ARHGAP31 100.00 0 ARSL 99.95 0 ASAH1 100.00 0 ATM 100.00 0 ATP2A2 100.00 0 ATP2C1 100.00 0 ATP6V0A2 99.98 0 ATP6V1A 100.00 0 ATP6V1E1 99.99 0 ATP7A 100.00 0 AXIN2 100.00 0 B3GALT6 63.11 0 B4GALT7 90.91 0 BANF1 97.55 0 BCS1L 100.00 0 BLM 100.00 0 BLOC1S3 95.69 0 BLOC1S6 100.00 0 BRAF 96.86 0 LRMDA 100.00 0 KDF1 100.00 0 CARD14 99.96 0 CBL 100.00 0 CBS 99.92 0 CD151 99.99 0 CDH3 100.00 0 CDK4 100.00 0 CDKN1B 100.00 0 CDKN2A 99.69 0 CDSN 99.93 0 CERS3 100.00 0 CHST14 99.81 0 CHST8 100.00 0 CHUK 99.59 0 CLCF1 100.00 0 CLDN1 100.00 0 CLDN10 100.00 0 COG6 100.00 0 COL11A1 100.00 0 COL12A1 100.00 0 COL17A1 100.00 0 COL1A1 100.00 0 COL1A2 99.41 0 COL3A1 99.99 0 COL5A1 98.23 0 COL5A2 100.00 0 COL7A1 100.00 0 CREBBP 99.98 0 CRLF1 89.67 0 CSTA 100.00 0 CTC1 99.71 0 CTSC 100.00 0 CYLD 100.00 0 CYP26C1 97.30 0 CYP4F22 99.27 0 DDB2 100.00 0 DIP2B 99.71 0 DKC1 99.92 0 DLL4 100.00 0 DLX3 99.95 0 DNMT1 99.69 0 DOCK6 99.13 0 DOLK 100.00 0 DSC3 98.96 0 DSE 100.00 0 DSG1 100.00 0 DSG2 99.89 0 DSG4 100.00 0 DSP 100.00 0 DST 100.00 0 DTNBP1 99.96 0 GLB1 100.00 0 ECM1 100.00 0 EDA 99.05 0 EDAR 100.00 0 EDARADD 100.00 0 EDN3 99.95 0 EDNRB 100.00 0 EFEMP2 100.00 0 ELN 99.96 0 ELOVL4 100.00 0 ENPP1 97.25 0 EOGT 100.00 0 EP300 100.00 0 EPG5 99.99 0 ERCC2 99.35 0 ERCC3 100.00 0 ERCC4 99.99 0 ERCC5 100.00 0 ERCC6 100.00 0 ERCC8 100.00 0 EVC 94.53 0 EVC2 98.69 0 EXPH5 100.00 0 F12 99.81 0 FAM111B 100.00 0 RETREG1 93.87 0 FAM83G 100.00 0 FBLN5 100.00 0 FBN1 100.00 0 FBN2 100.00 0 FERMT1 99.96 0 FGFR2 100.00 0 FGFR3 99.36 0 FH 100.00 0 FKBP14 100.00 0 FLCN 100.00 0 FGFR1 100.00 0 FLG2 100.00 0 FOXN1 100.00 0 FZD6 100.00 0 GALNT3 100.00 0 GAN 98.95 0 GBA1 100.00 0 GGCX 99.91 0 GHR 99.21 0 GJA1 100.00 0 GJB2 100.00 0 GJB3 100.00 0 GJB4 100.00 0 GJB6 100.00 0 GLA 100.00 0 GNAS 100.00 0 GORAB 100.00 0 GPR143 89.17 0 GRHL2 100.00 0 GSN 97.95 0 GTF2E2 100.00 0 GTF2H5 100.00 0 HAMP 100.00 0 HCCS 100.00 0 HDAC8 99.82 0 HFE 100.00 0 HJV 100.00 0 HGD 100.00 0 HLCS 100.00 0 HOXC13 96.56 0 HPGD 99.87 0 HPS1 100.00 0 HPS3 99.99 0 HPS4 99.99 0 HPS5 100.00 0 HPS6 96.32 0 HR 99.78 0 HRAS 100.00 0 IFT122 99.99 0 IFT43 100.00 0 ELP1 100.00 0 IKBKG 96.27 0 IL31RA 100.00 0 INSR 96.81 0 ITGA3 99.99 0 ITGA6 100.00 0 ITGB4 98.77 0 JUP 100.00 0 KANK2 99.99 0 KCNH1 100.00 0 KCTD1 100.00 0 KDM6A 99.63 0 KDSR 99.98 0 KIF1A 99.07 0 KIT 99.98 0 KITLG 100.00 0 KL 96.52 0 KLHL24 100.00 0 KLLN 100.00 0 KMT2D 99.99 0 KRAS 100.00 0 KREMEN1 92.10 0 KRT1 99.80 0 KRT10 99.93 0 KRT14 100.00 0 KRT16 99.48 0 KRT17 92.10 0 KRT2 100.00 0 KRT5 100.00 0 KRT6A 100.00 0 KRT6B 100.00 0 KRT6C 99.44 0 KRT71 99.95 0 KRT74 99.99 0 KRT81 100.00 0 KRT83 99.99 0 KRT85 99.27 0 KRT86 99.98 0 KRT9 100.00 0 LAMA4 99.75 0 LAMB3 100.00 0 LAMC2 99.43 0 LEMD3 99.97 0 LIPH 100.00 0 LIPN 100.00 0 LMNA 99.52 0 LMX1B 99.55 0 LORICRIN 100.00 0 LPAR6 100.00 0 LRP1 100.00 0 LTBP4 99.49 0 LYST 100.00 0 LZTR1 99.92 0 MAP2K1 100.00 0 MAP2K2 99.99 0 MAPRE2 100.00 0 MBTPS2 100.00 0 MC1R 100.00 0 MEN1 99.83 0 MITF 100.00 0 MLH1 99.99 0 MLPH 100.00 0 MMP1 99.99 0 MMP2 99.93 0 MPDU1 100.00 0 MPLKIP 100.00 0 MSH2 100.00 0 MSH6 99.92 0 MSMO1 100.00 0 MSX1 99.53 0 MUTYH 100.00 0 MYO5A 99.78 0 NF1 98.85 0 NF2 99.97 0 NFKBIA 99.97 0 NGF 100.00 0 NHP2 100.00 0 NIPAL4 100.00 0 NIPBL 99.62 0 RMRP 100.00 0 NOP10 100.00 0 NOTCH1 98.81 0 NRAS 100.00 0 NSDHL 100.00 0 NTRK1 98.91 0 OCA2 99.73 0 OFD1 97.68 0 ORAI1 93.55 0 OSMR 100.00 0 PADI3 100.00 0 PARN 100.00 0 PAX3 100.00 0 PDGFRB 100.00 0 PEX7 96.12 0 PHYH 99.87 0 PIGL 100.00 0 PIK3CA 100.00 0 PKP1 100.00 0 PLCD1 99.74 0 PLEC 99.33 0 PLOD1 98.77 0 PLOD3 99.97 0 PMS2 98.83 0 PNPLA1 99.66 0 POFUT1 99.99 0 POGLUT1 100.00 0 POLD1 99.84 0 POLH 100.00 0 NT5C3A 100.00 0 PORCN 99.13 0 PPP1CB 100.00 0 PRDM12 83.27 0 PRDM5 100.00 0 PRKAR1A 100.00 0 PRKD1 97.12 0 PSAT1 99.73 0 PSENEN 100.00 0 PTCH1 99.03 0 PTCH2 100.00 0 PTDSS1 100.00 0 PTEN 99.64 0 PTPN11 94.81 0 NECTIN1 99.68 0 NECTIN4 99.41 0 PYCR1 100.00 0 RAB27A 100.00 0 RAD21 100.00 0 RAF1 100.00 0 RASA2 99.74 0 RBPJ 99.69 0 RECQL4 96.90 0 RET 96.88 0 RHBDF2 100.00 0 RIN2 100.00 0 RIPK4 99.98 0 RIT1 100.00 0 RNF113A 100.00 0 RPL21 84.30 0 RRAS 98.63 0 RSPO1 100.00 0 RTEL1 100.00 0 SASH1 99.88 0 SCN11A 99.99 0 SCN9A 99.99 0 SDHB 99.35 0 SDHD 99.95 0 SEC23B 100.00 0 SERPINB7 100.00 0 SERPINB8 100.00 0 SERPING1 97.68 0 SETBP1 100.00 0 SGPL1 100.00 0 SHOC2 100.00 0 HHAT 93.18 0 SKIC2 100.00 0 SLC24A5 100.00 0 SLC27A4 99.97 0 SLC29A3 95.73 0 SLC2A10 97.06 0 SLC39A13 100.00 0 SLC39A4 100.00 0 SLC45A2 100.00 0 SLC6A19 99.99 0 SLURP1 100.00 0 SMAD3 100.00 0 SMARCAD1 99.97 0 SMARCB1 100.00 0 SMC3 100.00 0 SMPD1 100.00 0 SNAI2 100.00 0 SNAP29 100.00 0 SNRPE 99.04 0 SOS1 100.00 0 SOS2 99.97 0 SOX10 97.31 0 SPINK5 100.00 0 SPRED1 100.00 0 SPRY1 100.00 0 SPTLC1 99.44 0 SRD5A3 98.97 0 ST14 99.95 0 STK11 99.81 0 STS 99.94 0 SUFU 100.00 0 SULT2B1 100.00 0 SUMF1 100.00 0 TAT 100.00 0 TCHH 100.00 0 TERT 93.51 0 TFR2 100.00 0 TGFB2 99.97 0 TGFB3 100.00 0 TGFBR1 91.97 0 TGFBR2 100.00 0 TGM1 100.00 0 TGM3 100.00 0 TGM5 100.00 0 TINF2 99.96 0 TMC6 99.87 0 TNXB 100.00 0 TP63 100.00 0 TRPS1 100.00 0 TRPV3 99.99 0 TSC1 100.00 0 TSC2 99.99 0 SKIC3 99.99 0 TUBB 100.00 0 TWIST2 99.15 0 TYR 100.00 0 TYRP1 100.00 0 UBR1 100.00 0 USB1 100.00 0 UVSSA 100.00 0 VPS33B 100.00 0 WDR19 100.00 0 WDR35 100.00 0 WNK1 100.00 0 WNT10A 94.15 0 WRAP53 100.00 0 WRN 100.00 0 XPA 97.89 0 XPC 100.00 0 ZMPSTE24 100.00 0 ZNF469 99.97 0 ZNF750 100.00 0 TERC 100.00 0 t -
Metabolic disorders (213 genes) - VUB
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments ABAT 100.00 0 No comment ABCD1 99.93 0 No comment ACAT1 97.28 0 No comment ACOX1 100.00 0 No comment AGL 99.98 0 No comment AGPS 100.00 0 No comment AGXT 100.00 0 No comment ALDH18A1 100.00 0 No comment ALDH7A1 100.00 0 No comment ALDOA 100.00 0 No comment ALDOB 100.00 0 No comment ALG1 92.65 0 No comment ALG10 100.00 0 No comment ALG11 100.00 0 No comment ALG12 100.00 0 No comment ALG13 99.96 0 No comment ALG14 100.00 0 No comment ALG2 99.94 0 No comment ALG3 99.22 0 No comment ALG5 99.99 0 No comment ALG6 100.00 0 No comment ALG8 95.91 0 No comment ALG9 98.65 0 No comment AMACR 99.83 0 No comment AMT 99.94 0 No comment ASPA 100.00 0 No comment ATP6AP1 99.51 0 No comment ATP6V0A2 100.00 0 No comment ATP6V1A 100.00 0 No comment ATP6V1E1 100.00 0 No comment ATP7A 100.00 0 No comment ATP9B 99.97 0 No comment B3GALNT2 85.88 0 No comment B3GALT6 56.12 0 No comment B3GAT3 95.56 0 No comment B3GLCT 94.89 0 No comment B4GALNT1 100.00 0 No comment B4GALT1 100.00 0 No comment B4GALT7 93.23 0 No comment BCKDHA 100.00 0 No comment BCKDHB 100.00 0 No comment BTD 100.00 0 No comment CAD 100.00 0 No comment CCDC115 100.00 0 No comment CHST14 98.57 0 No comment CHST3 100.00 0 No comment CHST6 100.00 0 No comment CHSY1 91.67 0 No comment COG1 99.24 0 No comment COG2 100.00 0 No comment COG3 100.00 0 No comment COG4 100.00 0 No comment COG5 100.00 0 No comment COG6 100.00 0 No comment COG7 100.00 0 No comment COG8 100.00 0 No comment CRPPA 95.75 0 No comment CTH 100.00 0 No comment D2HGDH 100.00 0 No comment DAD1 100.00 0 No comment DBH 100.00 0 No comment DBT 100.00 0 No comment DDC 100.00 0 No comment DDOST 100.00 0 No comment DHDDS 100.00 0 No comment DNM1L 100.00 0 No comment DOLK 100.00 0 No comment DPAGT1 100.00 0 No comment DPM1 100.00 0 No comment DPM2 100.00 0 No comment DPM3 100.00 0 No comment ENO3 100.00 0 No comment EOGT 100.00 0 No comment EXT1 100.00 0 No comment EXT2 100.00 0 No comment FANCA 100.00 0 No comment FKRP 98.68 0 No comment FKTN 100.00 0 No comment FUT1 100.00 0 No comment G6PC1 100.00 0 No comment GAA 100.00 0 No comment GABRG2 92.03 0 No comment GALE 100.00 0 No comment GALK1 99.95 0 No comment GALNT3 100.00 0 No comment GALT 100.00 0 No comment GAMT 98.60 0 No comment GANAB 100.00 0 No comment GATM 99.26 0 No comment GBE1 100.00 0 No comment GCDH 100.00 0 No comment GCH1 96.30 0 No comment GCSH 76.04 0 No comment GFPT1 99.98 0 No comment GLDC 96.53 0 No comment GMPPA 100.00 0 No comment GMPPB 100.00 0 No comment GNE 100.00 0 No comment GNMT 100.00 0 No comment GNPAT 100.00 0 No comment GYS1 100.00 0 No comment GYS2 100.00 0 No comment HGD 100.00 0 No comment HLCS 100.00 0 No comment HMGCL 100.00 0 No comment HPRT1 94.60 0 No comment HSD17B4 100.00 0 No comment IVD 100.00 0 No comment LAMP2 100.00 0 No comment LARGE1 100.00 0 No comment LDHA 100.00 0 No comment LFNG 82.55 0 No comment MAGT1 100.00 0 No comment MAN1B1 99.99 0 No comment MAOA 99.95 0 No comment MCCC1 100.00 0 No comment MCCC2 99.99 0 No comment MGAT2 100.00 0 No comment MMAA 100.00 0 No comment MMAB 100.00 0 No comment MMACHC 100.00 0 No comment MOGS 98.73 0 No comment MPDU1 100.00 0 No comment MPI 100.00 0 No comment MMUT 100.00 0 No comment NANS 100.00 0 No comment NGLY1 99.98 0 No comment NUS1 100.00 0 No comment OAT 100.00 0 No comment OST4 100.00 0 No comment PCCA 100.00 0 No comment PCCB 99.98 0 No comment PEX1 100.00 0 No comment PEX10 88.47 0 No comment PEX11B 100.00 0 No comment PEX12 100.00 0 No comment PEX13 100.00 0 No comment PEX14 100.00 0 No comment PEX16 100.00 0 No comment PEX19 100.00 0 No comment PEX2 100.00 0 No comment PEX26 100.00 0 No comment PEX3 100.00 0 No comment PEX5 100.00 0 No comment PEX6 98.56 0 No comment PEX7 91.13 0 No comment PFKM 100.00 0 No comment PGAM2 100.00 0 No comment PGAP1 100.00 0 No comment PGAP2 100.00 0 No comment PGAP3 99.90 0 No comment PGM1 100.00 0 No comment PGM2 100.00 0 No comment PGM3 99.99 0 No comment PHGDH 100.00 0 No comment PHKA1 100.00 0 No comment PHKA2 100.00 0 No comment PHKB 100.00 0 No comment PHKG2 100.00 0 No comment PIGA 100.00 0 No comment PIGC 100.00 0 No comment PIGG 100.00 0 No comment PIGL 100.00 0 No comment PIGM 100.00 0 No comment PIGN 100.00 0 No comment PIGO 100.00 0 No comment PIGV 100.00 0 No comment PIGW 100.00 0 No comment PIGY 100.00 0 No comment PMM2 100.00 0 No comment PNPO 100.00 0 No comment POFUT1 100.00 0 No comment POGLUT1 100.00 0 No comment POMGNT1 100.00 0 No comment POMT1 100.00 0 No comment POMT2 99.90 0 No comment PRKCSH 100.00 0 No comment PSAT1 100.00 0 No comment PYGL 100.00 0 No comment PYGM 100.00 0 No comment RFT1 100.00 0 No comment RPN1 100.00 0 No comment RPN2 100.00 0 No comment RXYLT1 99.84 0 No comment SCP2 100.00 0 No comment SEC23B 100.00 0 No comment SLC25A22 100.00 0 No comment SLC2A1 99.94 0 No comment SLC35A1 100.00 0 No comment SLC35A2 100.00 0 No comment SLC35A3 100.00 0 No comment SLC35C1 100.00 0 No comment SLC35D1 99.99 0 No comment SLC39A8 97.00 0 No comment SLC3A1 100.00 0 No comment SLC6A19 100.00 0 No comment SLC6A8 98.78 0 No comment SLC7A9 100.00 0 No comment SPR 96.81 0 No comment SRD5A3 99.42 0 No comment SSR3 100.00 0 No comment SSR4 99.93 0 No comment ST3GAL3 100.00 0 No comment ST3GAL5 92.64 0 No comment STT3A 100.00 0 No comment STT3B 99.25 0 No comment TMEM165 89.91 0 No comment TMEM199 100.00 0 No comment TRAPPC11 100.00 0 No comment TUSC3 100.00 0 No comment VPS13B 99.25 0 No comment XYLT1 88.83 0 No comment XYLT2 98.70 0 No comment