Belgian Genetic Tests database- Diseases
- Cowden syndrome
Cowden syndrome
| Name: |
Cowden syndrome
|
| Description: |
A genodermatosis characterized by the presence of multiple hamartomas in various tissues and an increased risk for malignancies of the breast, thyroid, endometrium, kidney and colorectum. When CS is accompanied by germline PTEN mutations, it belongs to the PTEN hamartoma tumor syndrome (PHTS) group.
|
| ORPHAcode: |
201
|
| Synonyms: |
Cowden disease
Multiple hamartoma syndrome
|
| XREF(s): | |
| Analyte(s): | |
| Created: |
13 May 2019 - 01:02
|
| Changed: |
22 Jun 2023 - 16:14
|
- Ciliopathy / polycystic kidney and liver diseases / ADTKD/ nephronophtisis / Bardet-Biedl syndromes and kidney cancers (gene panel)
- Cowden disease (3 genes)
- Cowden disease (PTEN gene)
- Cowden disease / PTEN hamartoma tumor syndrome
- Epidermal nevus syndrome (gene panel)
- Overgrowth (gene panel)
- Renal cell carcinoma (kidney cancer) (gene panel)
- Venous malformation (3 genes)
-
Ciliopathy, polycystic kidney and liver diseases, ADTKD, nephronophtisis, Bardet-Biedl syndromes and kidney cancers (146 genes) - IPG
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments ADAMTS9 100.00 1 NM_182920.2 ALG8 100.00 1 NM_024079.5 ANKS6 100.00 1 NM_173551.5 ARL6 100.00 1 NM_001278293.3 BBIP1 100.00 1 NM_001195305.3 BBS1 100.00 1 NM_024649.5 BBS10 100.00 1 NM_024685.4 BBS12 100.00 1 NM_152618.3 BBS2 100.00 1 NM_031885.5 BBS4 100.00 1 NM_033028.5 BBS5 100.00 1 NM_152384.3 BBS7 100.00 1 NM_176824.3 BBS9 100.00 1 NM_198428.3 CDC73 100.00 1 NM_024529.5 CEP164 100.00 1 NM_014956.5 CEP290 100.00 1 NM_025114.4 CEP83 100.00 1 NM_016122.3 COL4A1 100.00 1 NM_001845.6 COL4A3 100.00 1 NM_000091.5 COL4A4 100.00 1 NM_000092.5 COL4A5 100.00 1 NM_033380.3 DCDC2 100.00 1 NM_016356.5 DNAJB11 100.00 1 NM_016306.6 DZIP1L 100.00 1 NM_173543.3 EYA1 100.00 1 NM_000503.6 FAN1 100.00 1 NM_014967.5 FH 100.00 1 NM_000143.4 FLCN 100.00 1 NM_144997.7 GANAB 100.00 1 NM_198334.3 GATA3 100.00 1 NM_001002295.2 GATM 100.00 1 NM_001482.3 GLIS2 100.00 1 NM_032575.3 HNF1B 100.00 1 NM_000458.4 IFT172 100.00 1 NM_015662.3 IFT27 100.00 1 NM_001177701.3 INVS 100.00 1 NM_014425.5 IQCB1 100.00 1 NM_001023570.4 LRP5 100.00 1 NM_002335.4 LRP6 100.00 1 NM_002336.3 LZTFL1 100.00 1 NM_020347.4 MAPKBP1 100.00 1 NM_014994.3 MET 100.00 1 NM_000245.4 MKKS 100.00 1 NM_170784.3 MKS1 100.00 1 NM_017777.4 NEK8 100.00 1 NM_178170.3 NOTCH2 99.00 1 NM_024408.4 NPHP1 100.00 1 NM_001128178.3 NPHP3 100.00 1 NM_153240.5 NPHP4 100.00 1 NM_015102.5 OFD1 100.00 1 NM_003611.3 PAX2 100.00 1 NM_000278.5 PKD1 100.00 1 NM_001009944.3 PKD2 100.00 1 NM_000297.4 PKHD1 100.00 1 NM_138694.4 PMM2 0.00 1 NM_000303.2 une seule position PRKCSH 100.00 1 NM_001289104.2 PTEN 100.00 1 NM_000314.8 REN 100.00 1 NM_000537.4 RPGRIP1L 96.00 1 NM_015272.5 SDCCAG8 100.00 1 NM_006642.5 SDHB 100.00 1 NM_003000.3 SDHD 100.00 1 NM_003002.4 SEC61A1 100.00 1 NM_013336.4 SEC63 100.00 1 NM_007214.5 TMEM67 100.00 1 NM_153704.6 TRIM32 100.00 1 NM_012210.4 TSC1 100.00 1 NM_000368.5 TSC2 100.00 1 NM_000548.5 TTC21B 100.00 1 NM_024753.5 TTC8 100.00 1 NM_144596.4 UMOD 100.00 1 NM_003361.4 VHL 100.00 1 NM_000551.4 WDPCP 100.00 1 NM_015910.7 WDR19 100.00 1 NM_025132.4 XPNPEP3 100.00 1 NM_022098.4 ZNF423 100.00 1 NM_001379286.1 AHI1 100.00 1 NM_001134831.2 ALG5 100.00 1 NM_013338.5 ALG9 100.00 1 NM_024740.2 ARL13B 100.00 1 NM_001174150.2 ARL3 100.00 1 NM_004311.4 ARMC9 100.00 1 NM_001352754.2 ATXN10 100.00 1 NM_013236.4 B9D1 100.00 1 NM_015681.6 B9D2 100.00 1 NM_030578.4 BAP1 100.00 1 NM_004656.4 C2CD3 100.00 1 NM_001286577.2 CC2D2A 100.00 1 NM_001378615.1 CCDC28B 100.00 1 NM_024296.5 CEP104 100.00 1 NM_014704.4 CEP120 100.00 1 NM_001375405.1 CEP41 100.00 1 NM_018718.3 CFAP418 100.00 1 NM_177965.4 CPLANE1 100.00 1 NM_001384732.1 CSPP1 100.00 1 NM_001382391.1 CYP24A1 100.00 1 NM_000782.5 DLG5 100.00 1 NM_004747.4 DYNC2H1 100.00 1 NM_001377.3 DYNC2I1 100.00 1 NM_018051.5 DYNC2I2 100.00 1 NM_052844.4 DYNC2LI1 100.00 1 NM_016008.4 DYNLT2B 100.00 1 NM_152773.5 EVC 100.00 1 NM_153717.3 EVC2 100.00 1 NM_147127.5 FAM149B1 100.00 1 NM_173348.2 HNF1A 100.00 1 NM_000545.8 HYLS1 100.00 1 NM_001134793.2 IFT122 100.00 1 NM_052989.3 IFT140 100.00 1 NM_014714.4 IFT43 100.00 1 NM_001102564.3 IFT52 100.00 1 NM_016004.5 IFT74 100.00 1 NM_025103.4 IFT80 100.00 1 NM_020800.3 IFT81 100.00 1 NM_014055.4 INPP5E 100.00 1 NM_019892.6 INTU 100.00 1 NM_015693.4 JAG1 100.00 1 NM_000214.3 KATNIP 100.00 1 NM_015202.5 KIAA0586 100.00 1 NM_001329943.3 KIAA0753 100.00 1 NM_014804.3 KIF14 100.00 1 NM_014875.3 KIF7 100.00 1 NM_198525.3 NEK1 100.00 1 NM_001199397.3 PARN 100.00 1 NM_002582.4 PDE6D 100.00 1 NM_002601.4 PIBF1 100.00 1 NM_006346.4 POC1B 100.00 1 NM_172240.3 RNF139 100.00 1 NM_007218.4 SDHA 100.00 1 NM_004168.4 SDHC 100.00 1 NM_003001.5 SEC61B 100.00 1 NM_006808.3 SLC41A1 100.00 1 NM_173854.6 SREBF1 100.00 1 NM_004176.5 SUFU 100.00 1 NM_016169.4 TCTN1 100.00 1 NM_001082538.3 TCTN2 100.00 1 NM_024809.5 TCTN3 100.00 1 NM_015631.6 TFAP2A 100.00 1 NM_001372066.1 TMEM107 100.00 1 NM_183065.4 TMEM138 100.00 1 NM_016464.5 TMEM216 100.00 1 NM_001173990.3 TMEM218 100.00 1 NM_001258244.2 TMEM231 100.00 1 NM_001077418.3 TMEM237 100.00 1 NM_001044385.3 TOGARAM1 100.00 1 NM_001308120.2 TRAF3IP1 100.00 1 NM_015650.4 TXNDC15 100.00 1 NM_024715.4 WDR35 100.00 1 NM_020779.4 -
Cowden (3 genes) - KUL
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments PTEN 100.00 1 SDHB 100.00 1 SDHD 100.00 1 -
Cowden disease (3 genes) -KUL
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments PTEN SDHB SDHC -
Overgrowth (24 genes) - IPG
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments ADARB2 100.00 1 NM_018702.4 AKT1 100.00 1 NM_001014431.2 AKT3 100.00 1 NM_005465.7 BRWD3 100.00 1 NM_153252.5 CDKN1C 100.00 1 NM_001362474.2 CHD3 100.00 1 NM_001005273.3 CHD8 100.00 1 NM_001170629.2 DIS3L2 100.00 1 NM_152383.4 DNMT3A 100.00 1 NM_175629.2 EED 100.00 1 NM_003797.5 EZH2 100.00 1 NM_004456.5 GPC3 100.00 1 NM_001164617.2 H1-4 100.00 1 NM_005321.3 KMT5B 100.00 1 NM_017635.5 MTOR 100.00 1 NM_004958.4 NFIX 100.00 1 NM_002501.4 NSD1 100.00 1 NM_022455.4 PDGFRB 100.00 1 NM_002609.4 PIK3CA 100.00 1 NM_006218.4 PPP2R5C 100.00 1 NM_001161725.1 PPP2R5D 100.00 1 NM_006245.4 PTEN 100.00 1 NM_000314.8 SETD2 100.00 1 NM_014159.6 TCF20 100.00 1 NM_005650.3 -
Renal cell carcinoma - UGent
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments BAP1 100.00 1 FH 100.00 0 FLCN 100.00 1 MAX 100.00 1 MET 100.00 0 MLH1 100.00 1 MSH2 100.00 1 MSH6 100.00 1 PMS2 100.00 1 PTEN 100.00 1 RET 100.00 0 SDHA 100.00 1 SDHB 100.00 1 SDHC 100.00 1 SDHD 100.00 1 TMEM127 100.00 1 VHL 100.00 1 TSC1 100.00 0 TSC2 100.00 0 HNF1B 100.00 0 PBRM1 100.00 0 -
epidermal nevus syndrome (65 genes) - KUL
Gene % of coding sequence sufficiently covered to detect heterozygous mutations Copy number variation Comments AKT1 0.00 0 Only hotspots in the gene ALK 0.00 0 Only hotspots in the gene BRAF 0.00 0 Only hotspots in the gene CDKN2A 0.00 0 Only hotspots in the gene CTNNB1 0.00 0 Only hotspots in the gene DDR2 0.00 0 Only hotspots in the gene EGFR 0.00 0 Only hotspots in the gene ERBB2 0.00 0 Only hotspots in the gene ERBB4 0.00 0 Only hotspots in the gene FGFR2 0.00 0 Only hotspots in the gene FGFR3 0.00 0 Only hotspots in the gene H3-3A 0.00 0 Only hotspots in the gene H3C2 0.00 0 Only hotspots in the gene HRAS 0.00 0 Only hotspots in the gene IDH1 0.00 0 Only hotspots in the gene IDH2 0.00 0 Only hotspots in the gene KIT 0.00 0 Only hotspots in the gene KRAS 0.00 0 Only hotspots in the gene MAP2K1 0.00 0 Only hotspots in the gene MET 0.00 0 Only hotspots in the gene NRAS 0.00 0 Only hotspots in the gene PDGFRA 0.00 0 Only hotspots in the gene PIK3CA 0.00 0 Only hotspots in the gene PIK3R1 0.00 0 Only hotspots in the gene PTEN 0.00 0 Only hotspots in the gene STK11 0.00 0 Only hotspots in the gene