Skeletal dysplasia (gene panel) | Belgian Genetic Tests database

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Full name:	Skeletal dysplasia (gene panel)
Test type:	Clinical
Test specialty:	Molecular Genetics
Test purpose:	Post-natal Diagnosis
Specimen:	Peripheral (whole) blood on EDTA, DNA
Method category:	Sequence analysis: entire coding region Whole Exome Sequencing (WES) Deletion/duplication analysis
Method technique:	Next Generation Sequencing (NGS)
Laboratory:	Centrum Medische Genetica - UZ Gent
RIZIV code:	565493-565504
Accreditation (ISO 15189):	2021-09-11 / 2026-09-10
Turnaround time (maximum):	6 months
Document(s):	H9.2-F1-Aanvraagformulier-postnataal-genetisch-onderzoek-v29.pdf315.8 KB H9.1-B10-Checklist-skeletale-dysplasie_v5.pdf196.96 KB
Created:	15 Dec 2020 - 17:00
Changed:	16 Dec 2022 - 13:18

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Skeletal dysplasia - UGent

Details

Gene	% of coding sequence sufficiently covered to detect heterozygous mutations	Copy number variation
ABCC9	99.92	1
ABL1	100.00	1
ACAN	91.51	1
ACP5	100.00	1
ACVR1	99.94	1
ADAMTS10	99.99	1
ADAMTS17	99.99	1
ADAMTSL2	99.99	1
AFF4	99.94	1
AGA	99.92	1
AGPS	98.83	1
AHDC1	100.00	1
AKT1	100.00	1
ALG12	100.00	1
ALG3	99.96	1
ALG9	99.73	1
ALPL	99.88	1
ALX1	97.99	1
ALX3	99.74	1
ALX4	100.00	1
AMER1	100.00	1
ANAPC1	75.83	1
ANKH	99.95	1
ANKRD11	99.85	1
ANO5	99.85	1
ANTXR2	99.67	1
ARHGAP31	100.00	1
ARID1A	99.83	1
ARID1B	99.69	1
SLURP1	99.99	1
ARSL	99.93	1
ASXL1	100.00	1
ASXL2	99.82	1
ATP6V0A2	99.92	1
B3GALT6	100.00	1
B3GAT3	87.74	1
B3GLCT	99.90	1
B4GALT7	99.99	1
B9D1	99.80	1
BBS1	100.00	1
BBS10	99.98	1
BBS12	100.00	1
BBS2	99.90	1
BBS4	99.88	1
BBS5	99.00	1
BBS7	99.42	1
BBS9	99.75	1
BHLHA9	100.00	1
BMP1	99.94	1
BMP2	99.79	1
BMPER	99.94	1
BMPR1B	99.61	1
BPNT2	100.00	1
C2CD3	99.88	1
CA2	99.62	1
CANT1	100.00	1
CASR	99.99	1
CC2D2A	99.95	1
CCDC134	100.00	1
CCDC8	100.00	1
CCN6	99.89	1
CCNQ	99.98	1
CD96	99.91	1
CDC45	99.77	1
CDC6	99.85	1
CDH3	99.98	1
CDKN1C	100.00	1
CDT1	100.00	1
CEP120	99.90	1
CEP290	98.10	1
CFAP410	100.00	1
CHD7	99.99	1
CHST14	100.00	1
CHST3	100.00	1
CHSY1	99.99	1
CILK1	99.69	1
CKAP2L	99.54	1
CLCN5	99.67	1
CLCN7	99.99	1
COG1	100.00	1
COG4	99.96	1
COL10A1	100.00	1
COL11A1	90.72	1
COL11A2	99.99	1
COL1A1	99.90	1
COL1A2	99.34	1
COL2A1	99.87	1
COL9A1	99.91	1
COL9A2	98.76	1
COL9A3	99.99	1
COLEC11	100.00	1
COMP	100.00	1
CPLANE1	99.81	1
CREB3L1	99.88	1
CREBBP	99.97	1
CRTAP	99.98	1
CSF1R	99.92	1
CSGALNACT1	100.00	1
CSPP1	98.31	1
CTSA	99.98	1
CTSC	99.97	1
CTSK	99.31	1
CUL7	100.00	1
CYP27B1	99.98	1
CYP2R1	99.96	1
DCC	99.96	1
DDR2	99.58	1
RIGI	99.84	1
DDX59	99.67	1
DHCR24	99.93	1
DHCR7	99.97	1
DHODH	99.99	1
DIP2C	100.00	1
DLL3	100.00	1
DLL4	100.00	1
DLX3	99.98	1
DLX5	99.98	1
DLX6	99.82	1
DMP1	99.99	1
DNMT3A	100.00	1
DOCK6	100.00	1
DPAGT1	100.00	1
DPM1	90.68	1
DSPP	99.99	1
DVL1	100.00	1
DVL3	99.99	1
DYM	99.96	1
DYNC2H1	99.66	1
DYNC2I1	99.99	1
DYNC2I2	99.98	1
DYNC2LI1	99.94	1
DYNLT2B	100.00	1
GLB1	100.00	1
EDNRA	99.97	1
EFNA4	99.92	1
EFNB1	99.95	1
EFTUD2	99.93	1
EIF2AK3	97.43	1
EIF4A3	99.99	1
ENPP1	99.88	1
EOGT	99.09	1
EP300	99.97	1
ERCC4	99.92	1
ERF	99.98	1
ESCO2	99.92	1
EVC	99.95	1
EVC2	99.97	1
EXT1	99.94	1
EXT2	99.98	1
EXTL3	99.99	1
EZH2	99.89	1
FAM111A	100.00	1
FAM20C	100.00	1
FBLN1	98.69	1
FBN1	99.85	1
FBN2	99.90	1
FBXW4	99.31	1
FERMT3	99.99	1
FGF10	99.95	1
FGF16	99.60	1
FGF23	100.00	1
FGF3	99.97	1
FGF4	100.00	1
FGF8	100.00	1
FGF9	100.00	1
FGFR1	100.00	1
FGFR2	99.99	1
FGFR3	100.00	1
FIG4	99.83	1
FKBP10	99.98	1
FLNA	99.99	1
FLNB	99.98	1
FMN1	99.98	1
FREM1	99.98	1
FUCA1	98.72	1
FZD2	99.98	1
GALNS	99.98	1
GALNT3	99.52	1
GDF3	100.00	1
GDF5	100.00	1
GDF6	100.00	1
GFER	100.00	1
GJA1	100.00	1
GLI3	100.00	1
GNAS	100.00	1
GNPAT	99.78	1
GNPNAT1	99.99	1
GNPTAB	99.76	1
GNPTG	100.00	1
GNS	99.59	1
GORAB	99.59	1
GPC6	99.98	1
GPX4	100.00	1
GREM1	100.00	1
GUSB	95.07	1
GZF1	100.00	1
HDAC4	99.98	1
HDAC8	99.74	1
HES7	100.00	1
HGSNAT	99.93	1
HNRNPK	99.93	1
HOXA11	99.99	1
HOXA13	99.94	1
HOXD13	99.98	1
HPGD	99.98	1
HS2ST1	95.79	1
HSPG2	99.87	1
IDH1	99.91	1
IDH2	100.00	1
IDS	99.82	1
IDUA	99.99	1
IFIH1	99.84	1
IFITM5	100.00	1
IFT122	99.98	1
IFT140	100.00	1
IFT172	99.98	1
IFT43	99.97	1
IFT52	99.82	1
IFT80	99.69	1
IFT81	94.64	1
IHH	100.00	1
IKBKG	57.34	1
IL11RA	99.98	1
IL1RN	99.64	1
INPPL1	99.97	1
KAT6B	99.79	1
KDELR2	99.98	1
KIAA0753	100.00	1
KIAA1217	99.99	1
KIF22	99.89	1
KIF7	100.00	1
KMT2D	99.98	1
LBR	99.66	1
LEMD3	99.07	1
LFNG	100.00	1
LIFR	99.69	1
LMBR1	99.88	1
LMNA	99.96	1
LMX1B	100.00	1
LONP1	99.99	1
LPIN2	100.00	1
CORIN	99.89	1
LRP5	99.95	1
LTBP2	99.97	1
MAFB	100.00	1
MAN2B1	99.99	1
MAN2C1	99.96	1
MAP3K7	99.33	1
MASP1	99.99	1
MATN3	99.97	1
MBTPS2	99.81	1
MEGF8	99.90	1
MEOX1	99.99	1
MESP2	99.99	1
MGP	99.95	1
MIA2	99.72	1
MIA3	99.84	1
MKKS	100.00	1
MKS1	99.92	1
MMP13	99.96	1
MMP2	99.96	1
MMP9	100.00	1
MNX1	99.83	1
MPDU1	99.97	1
MSX2	100.00	1
MTX2	99.20	1
MYCN	100.00	1
MYL11	99.85	1
NAGLU	100.00	1
NANS	100.00	1
NBAS	99.86	1
NEK1	99.83	1
NEU1	99.98	1
NF1	99.88	1
NFIX	99.99	1
NIPBL	99.34	1
NKX3-2	99.99	1
NLRP3	100.00	1
NOG	100.00	1
NOTCH1	99.98	1
NOTCH2	99.03	1
NPPC	100.00	1
NPRL2	99.99	1
NSD1	99.98	1
NSDHL	99.87	1
NXN	99.92	1
OBSL1	100.00	1
OFD1	99.68	1
SLC25A15	99.70	1
ORC4	99.70	1
ORC6	99.82	1
OSTM1	99.56	1
P3H1	99.89	1
P4HB	99.99	1
PAM16	100.00	1
PAN2	99.95	1
PAPSS2	99.91	1
PAX3	100.00	1
PCNT	99.97	1
PCYT1A	100.00	1
PDE3A	99.97	1
PDE4D	99.89	1
PEX5	99.89	1
PEX7	99.72	1
PGM3	99.94	1
PHEX	99.83	1
PHGDH	99.79	1
PIGT	99.95	1
PIGV	100.00	1
PIK3C2A	99.92	1
PIK3CA	99.74	1
PISD	100.00	1
PITX1	100.00	1
PLEKHM1	99.77	1
PLOD2	99.66	1
PLS3	99.75	1
POC1A	99.98	1
POLR1A	99.93	1
POLR1C	100.00	1
POLR1D	100.00	1
BVES	99.94	1
PORCN	99.98	1
PPIB	100.00	1
PRKAR1A	100.00	1
PRKG2	99.75	1
PRMT7	99.95	1
PSAT1	99.98	1
PSPH	99.09	1
PTDSS1	99.95	1
PTH1R	99.93	1
PTHLH	99.89	1
PTPN11	99.98	1
PUF60	100.00	1
PYCR1	99.99	1
RAB23	99.97	1
RAB33B	100.00	1
RAD21	99.91	1
RASGRP2	100.00	1
RBM8A	99.37	1
RBPJ	99.96	1
RECQL4	100.00	1
RFT1	99.79	1
RIN1	100.00	1
RNU4ATAC	99.95	1
ROR2	99.99	1
RPGRIP1L	96.35	1
RPL13	99.96	1
RUNX2	100.00	1
SALL1	100.00	1
SALL4	100.00	1
SBDS	99.93	1
SCARF2	99.94	1
SCUBE3	99.96	1
SEC24D	99.94	1
SERPINF1	100.00	1
SERPINH1	100.00	1
SETD2	99.91	1
SF3B4	99.65	1
SFRP4	99.99	1
SGSH	100.00	1
SH3BP2	100.00	1
SH3PXD2B	100.00	1
SHH	100.00	1
SHOX	92.70	1
HHAT	99.98	1
SLC10A7	99.95	1
SLC17A5	99.71	1
SLC26A2	100.00	1
SLC29A3	99.98	1
SLC34A1	99.99	1
SLC34A3	100.00	1
SLC35C1	100.00	1
SLC35D1	87.50	1
SLC39A13	99.98	1
SLCO2A1	99.99	1
SLCO5A1	99.98	1
SMAD3	99.99	1
SMAD4	99.97	1
SMARCAL1	99.97	1
SMC1A	99.98	1
SMC3	99.91	1
SMO	99.99	1
SMOC1	100.00	1
SNRPB	99.96	1
SNX10	99.96	1
SOST	100.00	1
SOX9	100.00	1
SP7	100.00	1
SPARC	99.94	1
SUCO	98.05	1
SULF1	99.99	1
SUMF1	99.95	1
TALDO1	100.00	1
TAPT1	99.64	1
TBCE	99.91	1
TBX15	99.81	1
TBX3	100.00	1
TBX4	99.96	1
TBX5	99.98	1
TBX6	99.99	1
TBXAS1	100.00	1
TCF12	99.97	1
TCIRG1	99.99	1
TCOF1	99.99	1
TCTN2	99.99	1
TCTN3	99.92	1
TENT5A	99.97	1
TERT	100.00	1
TGFB1	100.00	1
TGFB2	99.87	1
TGFBR1	99.94	1
TGFBR2	99.98	1
THPO	100.00	1
TMEM165	99.97	1
TMEM216	99.98	1
TMEM231	88.88	1
TMEM38B	99.95	1
TMEM67	99.69	1
TNFRSF11A	100.00	1
TNFRSF11B	100.00	1
TNFSF11	99.89	1
TONSL	100.00	1
TP63	99.97	1
TRAPPC2	99.41	1
TREM2	100.00	1
TRIP11	99.90	1
TRPS1	100.00	1
TRPV4	100.00	1
TRPV6	99.99	1
TTC21B	99.50	1
TTC8	99.67	1
TWIST1	100.00	1
TYROBP	99.95	1
VDR	99.86	1
VPS35L	99.07	1
WDPCP	99.87	1
WDR19	99.80	1
WDR35	99.92	1
WNT1	99.97	1
WNT10B	99.97	1
WNT3	99.99	1
WNT3A	100.00	1
WNT5A	100.00	1
WNT7A	99.99	1
XRCC4	99.89	1
XYLT1	99.98	1
XYLT2	99.97	1
ZMPSTE24	98.70	1
ZSWIM6	98.94	1